Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs34452876 | chr6:27376162 | TGAA/T | 3.16E-7 | 212 | 16.5 | 13.6 | 9.77 | KM Plot |
| KIRP | rs34466995 | chr14:96071401 | C/G | 1.43E-6 | 210 | 14.8 | 21.97 | 9.77 | KM Plot |
| KIRP | rs34469320 | chr1:63811237 | A/G | 3.91E-6 | 208 | 15.2 | 17.2 | 8.03 | KM Plot |
| KIRP | rs34493019 | chr6:25714959 | A/G | 4.64E-9 | 209 | 16.73 | 13.78 | 9 | KM Plot |
| KIRP | rs34495572 | chr1:63812779 | T/C | 4.01E-6 | 209 | 14.87 | 18 | 8.03 | KM Plot |
| KIRP | rs34505829 | chr6:28133239 | A/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs34543938 | chr6:27624640 | A/G | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs34545755 | chr5:79933653 | T/TGAAA | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs34546498 | chr6:26961280 | C/T | 2.83E-7 | 212 | 15.88 | 12 | 9.77 | KM Plot |
| KIRP | rs34546986 | chr6:28362309 | G/A | 2.08E-7 | 211 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs34550936 | chr6:26361985 | A/G | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs34553709 | chr11:8543689 | T/C | 0.000456 | 213 | 15.88 | 17.2 | 4.82 | KM Plot |
| KIRP | rs34571532 | chr1:89463233 | AG/A | 0.000566 | 204 | 20.15 | 19.3 | 8.73 | KM Plot |
| KIRP | rs34573979 | chr6:27480526 | C/T | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs34583603 | chr5:176689373 | TG/T | 3.89E-7 | 210 | 4.88 | 20.53 | 15.33 | KM Plot |